1st ROUND:
1. Toronto FC
2. Columbus Crew
3. Kansas City Wizards
4. Real Salt Lake
5. Los Angeles Galaxy
6. Colorado Rapids (from N.Y. Red Bulls) – A
7. Chivas USA
8. Chicago Fire
9. FC Dallas
10. Los Angeles Galaxy (from Colorado Rapids) – B
11. D.C. United
12. New England Revolution
13. Houston Dynamo
2nd ROUND:
14. FC Dallas (from Toronto FC) – C
15. Columbus Crew
16. Los Angeles Galaxy (from Kansas City Wizards) – D
17. Colorado Rapids (from Real Salt Lake) – E
18. Colorado Rapids (from Los Angeles Galaxy) – F
19. N.Y. Red Bulls
20. Los Angeles Galaxy (from Real Salt Lake, Chivas USA) – G
21. Chicago Fire
22. FC Dallas
23. Los Angeles Galaxy (from Colorado Rapids) – H
24. D.C. United
25. New England Revolution
26. Houston Dynamo
3rd ROUND:
27. Toronto FC
28. Dallas (from Columbus Crew) – I
29. Kansas City Wizards
30. Real Salt Lake
31. Colorado (from Los Angeles) – J
32. D.C. United (from Colorado, New York) – K
33. N.Y. Red Bulls (from Chivas USA, Columbus, New England, Chivas USA) – L
34. Chicago Fire
35. Colorado Rapids (from FC Dallas) – M
36. Colorado Rapids
37. D.C. United
38. New England Revolution
39. Houston Dynamo
4th ROUND:
40. Toronto FC
41. Columbus Crew
42. Kansas City Wizards
43. Dallas (from Real Salt Lake) – N
44. Los Angeles Galaxy
45. LA (from N.Y. Red Bulls) – O
46. Chivas USA
47. Chicago Fire
48. FC Dallas
49. Columbus Crew (from Colorado Rapids) – P
50. D.C. United
51. New England Revolution
52. Houston Dynamo

How the orginal picks changed hand:
Selection Order:

A – 1st Round, 6th pick:
Colorado obtained this pick via the trade of Jean Philippe Peguero. (April 21, 2006)
B – 1st Round, 10th pick:
Los Angeles received Colorado's pick for the rights to Aaron King. (February 7, 2006)
C – 2nd Round 1st pick:
Ronnie O'Brien was traded to FC Toronto for Adrian Serioux and their second round pick. (November 17, 2006)
D – 2nd Round, 3rd pick:
Kevin Hartman was traded from Los Angeles to Kansas City for their second round pick. (December 15, 2006)
 E – 2nd Round, 4th pick:
The rights to Jordan Cila were traded from Colorado to Real Salt Lake for the 2007 natural
second round pick. (February 18, 2006)
F – 2nd Round, 5th pick:
Joe Cannon was traded from Colorado to Los Angeles for Herculez Gomez and Ugo Ihemelu and their second round pick. (December 1, 2006)
G – 2nd Round,7th pick:
The rights to Paul Broome were traded from Los Angeles to Real Salt Lake for the 2007
SuperDraft second round pick (from Chivas). (June 24, 2006)
H – 2nd Round, 10th pick:
Los Angeles exchanges their natural second round selection (18th) for Colorado's natural second round selection (23rd) during the Joe Cannon trade. (December 1, 2006)
I – 3rd Round, 2nd pick:
The 2007 SuperDraft natural third round pick was traded from Columbus to FC Dallas for the FC Dallas 2006 first overall fourth round pick (38th). (January 20, 2006)
J – 3rd Round, 5th pick:
Colorado received Los Angeles' natural third round selection when Cornell Glen played in less than 16 games in the 2006 season. (April 7, 2006)
K – 3rd Round, 6th pick:
The rights to Brandon Prideaux were traded from D.C. United to Colorado for the third round 2007 SuperDraft pick originally from New York and the natural third round pick in the 2008 SuperDraft. (December 14, 2006)
Thiago Martins and two 2007 SuperDraft picks were traded from New York to Colorado for Jean Philippe Peguero. (April 21, 2006)
L- 3rd Round, 7th pick:
Chivas USA gave New York their designated player slot and third round pick for Amado Guevara. (November 21, 2006)
M – 3rd Round, 9th pick:
Colorado received natural third round from Dallas for the use of Youth International slot in 2006. (February 8, 2006)
N – 4th Round, 4th pick:
The rights to Brian Dunseth were traded from FC Dallas to Real Salt Lake for 2007 SuperDraft
natural fourth round pick. (January 4, 2005) O – 4th Round, 6th pick:
Los Angeles traded John Wolyniec to New York and received their fourth round SuperDraft selection. (August 17, 2006)
P – 4th Round,10th pick:
Columbus received the fourth round pick from Colorado as a condition of the trade for Chris Wingert. (January 18, 2006)